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elm1 protein (Zea mays) - STRING interaction network
"elm1" - Phytochromobilin:ferredoxin oxidoreductase chloroplastic in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
elm1Phytochromobilin-ferredoxin oxidoreductase chloroplastic; Elongated mesocotyl1; Uncharacterized protein (297 aa)    
Predicted Functional Partners:
HO-1
Elongated mesocotyl2; Heme oxygenase 1; Uncharacterized protein (285 aa)
         
  0.975
ho2
Heme oxygenase2 (281 aa)
         
  0.947
FDX1
Ferredoxin-1, chloroplastic; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. Occupies a key position both for transferring the photoreducing power to Fd- NADP(+) oxidoreductase (FNR), hence the formation of NADPH, and for mediating the cyclic electron flow around photosystem I (PSI) (150 aa)
     
 
  0.914
100273248
Genomes uncoupled4-like protein (271 aa)
     
   
  0.892
phyA1
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1131 aa)
           
  0.841
103639469
annotation not available (870 aa)
           
  0.836
phyC1
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1135 aa)
           
  0.831
pco105988a
Zinc finger protein CONSTANS-LIKE 1; Constans1 isoform 1; Constans1 isoform 2; Uncharacterized protein (428 aa)
           
  0.799
103625981
2Fe-2S ferredoxin-like superfamily protein (192 aa)
     
 
  0.784
PHYA1
Phytochrome A; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose- bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reducta [...] (1131 aa)
           
  0.782
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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