STRINGSTRING
AY110439 protein (Zea mays) - STRING interaction network
"AY110439" - Hypothetical protein LOC100216864 in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AY110439Hypothetical protein LOC100216864 (363 aa)    
Predicted Functional Partners:
GRMZM5G837364_P02
Methionine aminopeptidase 1A (390 aa)
     
 
  0.900
GRMZM2G113062_P03
Hypothetical protein LOC100274208 (395 aa)
     
 
  0.900
GRMZM2G101438_P02
Hypothetical protein LOC100216916 (370 aa)
     
 
  0.900
IDP454
Hypothetical protein LOC100272473 ; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (360 aa)
     
 
  0.900
GRMZM2G068982_P01
Hypothetical protein LOC100192977 (341 aa)
     
 
  0.900
umc1554
Hypothetical protein LOC100274215 (368 aa)
     
 
  0.900
Zm.28883
Putative acyl-activating enzyme 19 (1140 aa)
       
      0.894
Zm.27794
Trigger factor-like protein TIG, Chloroplastic (528 aa)
     
      0.708
GRMZM2G131473_P02
Hypothetical protein LOC100191629 ; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (448 aa)
     
 
  0.679
GRMZM2G048944_P01
Annotation not available (76 aa)
     
 
  0.679
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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