STRINGSTRING
pco087306 protein (Zea mays) - STRING interaction network
"pco087306" - LOC100282453 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco087306LOC100282453 (490 aa)    
Predicted Functional Partners:
Zm.43459
CDA1 (316 aa)
   
 
  0.989
Zm.84726
Uridine kinase (480 aa)
 
0.985
Zm.19873
Uridine kinase-like protein 3 (488 aa)
 
0.985
gpm9
LOC100284489 (290 aa)
 
0.985
GRMZM2G142383_P01
Annotation not available (159 aa)
 
0.985
Zm.23028
LOC100286008 (181 aa)
 
0.983
GRMZM2G149535_P01
Hypothetical protein LOC100217180 (345 aa)
   
 
  0.983
Zm.80027
Uridylate kinase (342 aa)
   
 
  0.983
GRMZM2G367026_P01
Hypothetical protein LOC100382013 (822 aa)
   
  0.973
NRH3
Pyrimidine-specific ribonucleoside hydrolase rihB (315 aa)
     
  0.970
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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