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STRINGSTRING
cadtfr8 protein (Zea mays) - STRING interaction network
"cadtfr8" - Nuclear transcription factor Y subunit B-8 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cadtfr8Nuclear transcription factor Y subunit B-8 (830 aa)    
Predicted Functional Partners:
pco061382
Histone-lysine N-methyltransferase ATX4 (1591 aa)
     
 
  0.731
GCP2
Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity (381 aa)
       
 
  0.668
ca5p2
Uncharacterized protein (129 aa)
     
 
  0.657
CA5P6
Nuclear transcription factor Y subunit C-9 (129 aa)
     
 
  0.657
100273685
Nuclear transcription factor Y subunit C-2; Nuclear transcription factor Y subunit C-2 isoform 1; Nuclear transcription factor Y subunit C-2 isoform 2; Nuclear transcription factor Y subunit C-2 isoform 3; Uncharacterized protein (251 aa)
     
 
  0.657
CA5P14
Nuclear transcription factor Y subunit C-9 (202 aa)
     
 
  0.657
ca5p3
CCAAT-HAP5 transcription factor; Nuclear transcription factor Y subunit C-2; Uncharacterized protein (255 aa)
     
 
  0.657
100217109
Nuclear transcription factor Y subunit C-2; Uncharacterized protein (248 aa)
     
 
  0.657
pco147903a
Nuclear transcription factor Y subunit C-2 (200 aa)
     
 
  0.657
CA5P15
Histone-like transcription factor and archaeal histone family protein (203 aa)
     
 
  0.657
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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