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STRINGSTRING
100500945 protein (Zea mays) - STRING interaction network
"100500945" - Necrotic4 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100500945Necrotic4 (203 aa)    
Predicted Functional Partners:
541866
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX (544 aa)
   
 
  0.985
prpo1
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX (537 aa)
   
 
  0.985
cpx2
Coproporphyrinogen III oxidase2 (137 aa)
 
     
  0.970
LES22
Uroporphyrinogen decarboxylase, chloroplastic; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (394 aa)
   
 
  0.957
GRMZM2G377609_P03
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family (402 aa)
   
 
  0.942
GRMZM2G365644_P02
annotation not available (392 aa)
   
 
  0.942
103636082
Uroporphyrinogen decarboxylase 1 chloroplastic (204 aa)
   
 
  0.942
GRMZM2G024738_P04
Uroporphyrinogen decarboxylase (400 aa)
   
 
  0.942
pco148653
Squalene monooxygenase (534 aa)
     
   
  0.921
GRMZM2G091456_P02
Squalene epoxidase 1 (530 aa)
     
   
  0.921
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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