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pck2 protein (Zea mays) - STRING interaction network
"pck2" - Phosphoenolpyruvate carboxykinase homolog2 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pck2Phosphoenolpyruvate carboxykinase homolog2 (659 aa)    
Predicted Functional Partners:
mas1
Malate synthase, glyoxysomal (563 aa)
   
 
  0.995
PPDK2
Pyruvate, phosphate dikinase 2; Formation of phosphoenolpyruvate, which is the primary acceptor of CO(2) in C4 and some Crassulacean acid metabolism plants; Belongs to the PEP-utilizing enzyme family (952 aa)
   
 
  0.968
cl5118_1
Citrate synthase ; Belongs to the citrate synthase family (472 aa)
   
 
  0.962
cts1
Citrate synthase ; Belongs to the citrate synthase family (472 aa)
   
 
  0.962
mdh6
Malate dehydrogenase [NADP], chloroplastic; The chloroplastic, NADP-dependent form is essential for the photosynthesis C4 cycle, which allows plants to circumvent the problem of photorespiration. In C4 plants, NADP-MDH activity acts to convert oxaloacetate to malate in chloroplasts of mesophyll cells for transport to the bundle sheath cells (432 aa)
     
 
  0.956
100193614
Glutamate dehydrogenase ; Belongs to the Glu/Leu/Phe/Val dehydrogenases family (411 aa)
   
 
  0.953
GDH1
Glutamate dehydrogenase (411 aa)
   
 
  0.953
100502380
Amino acid dehydrogenase family protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family (648 aa)
   
 
  0.953
pco118382
Aspartate aminotransferase (459 aa)
     
 
  0.944
100274119
Aspartate aminotransferase (430 aa)
     
 
  0.941
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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