STRINGSTRING
serk1 protein (Zea mays) - STRING interaction network
"serk1" - Somatic embryogenesis receptor-like kinase1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
serk1Somatic embryogenesis receptor-like kinase1 (622 aa)    
Predicted Functional Partners:
Zm.26184
Brassinosteroid LRR receptor kinase (EC-2.7.11.1) (1122 aa)
       
 
0.912
KAPP
Kinase associated protein phosphatase (583 aa)
       
 
  0.822
FHA12
LOC100285824 (581 aa)
       
 
  0.784
GRMZM2G149979_P02
Hypothetical protein LOC100384688 (459 aa)
           
  0.721
Zm.102584
UBX domain-containing protein 2-like (461 aa)
           
  0.721
Zm.135431
Phytosulfokine receptor 1 (1051 aa)
     
 
0.701
GRMZM2G452142_P01
Hypothetical protein LOC100272954 (1029 aa)
     
 
0.701
PYL2
Hypothetical protein LOC100382238 (LOC100382238), mRNA (205 aa)
           
  0.569
PYL3
Hypothetical protein LOC100383950 (188 aa)
           
  0.563
PYL12
Hypothetical protein LOC100274679 (212 aa)
           
  0.529
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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