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STRINGSTRING
tubtf12 protein (Zea mays) - STRING interaction network
"tubtf12" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tubtf12Uncharacterized protein (357 aa)    
Predicted Functional Partners:
emp11
Pentatricopeptide repeat-containing protein (698 aa)
           
  0.697
CRP1
Pentatricopeptide repeat-containing protein CRP1, chloroplastic; Required for the translation of the chloroplast petA and petD mRNAs. Required for the processing of the petD mRNA from a polycistronic precursor. Binds with high affinity to the 5’-UTR of the chloroplastic petA transcript. Activates psaC and petA translation by binding their 5’-UTRs; Belongs to the PPR family. P subfamily (668 aa)
     
        0.595
100382076
Pentatricopeptide repeat-containing protein (513 aa)
     
   
  0.556
100279771
Ypt/Rab-GAP domain of gyp1p superfamily protein (740 aa)
     
 
  0.525
GRMZM2G006206_P01
Ypt/Rab-GAP domain of gyp1p superfamily protein (288 aa)
     
 
  0.525
103642476
annotation not available (837 aa)
     
 
  0.525
100383543
Pentatricopeptide repeat-containing protein chloroplastic (756 aa)
     
   
  0.516
GRMZM2G368486_P01
CBF1 interacting corepressor (531 aa)
           
  0.442
100285244
Protein kinase-like (625 aa)
           
  0.442
103636058
Pentatricopeptide repeat-containing protein (611 aa)
     
   
  0.433
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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