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STRINGSTRING
cl55515_1a protein (Zea mays) - STRING interaction network
"cl55515_1a" - Alpha/beta-Hydrolases superfamily protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl55515_1aAlpha/beta-Hydrolases superfamily protein (383 aa)    
Predicted Functional Partners:
GRMZM5G872217_P01
annotation not available (376 aa)
     
   
  0.509
GRMZM5G819452_P01
annotation not available (287 aa)
     
   
  0.509
GRMZM2G089092_P03
annotation not available (192 aa)
           
  0.501
cl4689_1
TMPIT-like protein (354 aa)
           
  0.457
100277122
TMPIT-like protein (368 aa)
           
  0.457
103653083
TMPIT-like protein (372 aa)
           
  0.457
GRMZM2G159155_P01
SWR1-complex protein 4; DNA methyltransferase 1-associated protein 1 (155 aa)
           
  0.457
AC210727.4_FGP002
SWR1-complex protein 4 (270 aa)
           
  0.457
cl10665_1
Polynucleotidyl transferase ribonuclease H-like superfamily protein; Histone mRNA exonuclease 1; Uncharacterized protein (330 aa)
           
  0.443
umc1347
Exonuclease domain-containing protein 1 (436 aa)
           
  0.443
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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