• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
GRMZM5G871980_P01 protein (Zea mays) - STRING interaction network
"GRMZM5G871980_P01" - SEC13 protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM5G871980_P01SEC13 protein; SEC13-related protein; Uncharacterized protein ; Belongs to the WD repeat SEC13 family (305 aa)    
Predicted Functional Partners:
GRMZM2G435661_P01
annotation not available (841 aa)
     
  0.977
103633515
annotation not available (1130 aa)
     
  0.977
TIDP2729
Protein transport protein SEC31 homolog B (1129 aa)
     
  0.977
100194158
Protein transport protein Sec24-like (1018 aa)
     
  0.942
103625891
annotation not available (753 aa)
     
  0.931
pco137522
annotation not available (724 aa)
     
  0.931
GRMZM2G056695_P01
Sec23/Sec24 protein transport family protein (404 aa)
     
  0.931
103652905
Sec23/Sec24 protein transport family protein (791 aa)
     
  0.931
GRMZM2G348675_P02
Nuclear pore complex protein NUP107 (1102 aa)
     
 
  0.930
101202711
Nuclear pore complex protein NUP98A (921 aa)
     
  0.914
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (10%) [HD]