STRINGSTRING
arf26 protein (Zea mays) - STRING interaction network
"arf26" - Putative uncharacterized protein in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arf26Putative uncharacterized protein ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (683 aa)    
Predicted Functional Partners:
iaa36
IAA19 - auxin-responsive Aux/IAA family member ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (343 aa)
       
    0.979
GRMZM2G084993_P01
IAA19 - auxin-responsive Aux/IAA family member (289 aa)
       
    0.979
AUX35
Hypothetical protein LOC100192924 ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (230 aa)
         
  0.802
Zm.3607
IAA30 - auxin-responsive Aux/IAA family member ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (271 aa)
         
  0.801
Zm.103137
IAA16 - auxin-responsive Aux/IAA family member ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (234 aa)
         
    0.800
iaa6
IAA27 - auxin-responsive Aux/IAA family member ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (387 aa)
         
    0.800
AUX43
IAA14 - auxin-responsive Aux/IAA family member ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (202 aa)
         
    0.800
iaa42
Auxin-responsive protein IAA5-like; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (347 aa)
         
    0.800
iaa3
Hypothetical protein LOC100304254 ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (226 aa)
         
    0.800
AUX34
Hypothetical protein LOC100193994 ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (486 aa)
         
    0.800
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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