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STRINGSTRING
GRMZM5G874562_P01 protein (Zea mays) - STRING interaction network
"GRMZM5G874562_P01" - RING/U-box superfamily protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM5G874562_P01RING/U-box superfamily protein (483 aa)    
Predicted Functional Partners:
GRMZM5G871425_P01
Embryo defective 2016 (438 aa)
       
 
  0.960
GRMZM2G312974_P01
annotation not available (935 aa)
       
 
  0.960
GRMZM2G169871_P02
Protein arginine N-methyltransferase 1.5 (380 aa)
     
 
  0.957
100193941
FKBP12-interacting protein of 37 kDa (370 aa)
     
 
  0.957
100281493
N6-adenosine-methyltransferase MT-A70-like protein ; Belongs to the MT-A70-like family (704 aa)
     
   
  0.680
103632361
annotation not available (429 aa)
     
   
  0.678
GRMZM5G807835_P01
annotation not available (281 aa)
           
  0.597
GRMZM2G461356_P01
annotation not available (909 aa)
       
 
  0.549
GRMZM2G075551_P03
D111/G-patch domain-containing protein (297 aa)
     
   
  0.545
GRMZM2G129457_P02
DNA-directed RNA polymerases (257 aa)
           
  0.535
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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