STRINGSTRING
Zm.98 protein (Zea mays) - STRING interaction network
"Zm.98" - 3-phosphoshikimate 1-carboxyvinyltransferase Fragment (EC 2.5.1.19) in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.983-phosphoshikimate 1-carboxyvinyltransferase Fragment (EC 2.5.1.19) (390 aa)    
Predicted Functional Partners:
GRMZM2G161566_P01
Shikimate kinase (303 aa)
 
 
  0.928
sad1
Shikimate dehydrogenase1 (543 aa)
 
 
  0.919
GRMZM2G004590_P01
Hypothetical protein LOC100191326 (293 aa)
 
 
  0.904
GRMZM2G070218_P01
Shikimate kinase (305 aa)
 
 
  0.903
cl40355_1
LOC100285997 (509 aa)
 
 
  0.897
GRMZM5G804881_P01
Hypothetical protein LOC100272333 (532 aa)
 
 
  0.896
pco087106a
Hypothetical protein LOC100272984 (429 aa)
 
  0.895
GRMZM2G164562_P01
Chorismate synthase 2 (440 aa)
 
  0.895
GRMZM2G119249_P02
Shikimate kinase family protein (273 aa)
     
  0.879
GRMZM2G179454_P01
Hypothetical protein LOC100191856 (253 aa)
       
  0.844
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (10%) [HD]