STRINGSTRING
GRMZM5G879116_P01 protein (Zea mays) - STRING interaction network
"GRMZM5G879116_P01" - Hypothetical protein LOC100279446 in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM5G879116_P01Hypothetical protein LOC100279446 (437 aa)    
Predicted Functional Partners:
GRMZM2G542686_P01
Annotation not available (300 aa)
       
 
  0.771
Zm.25284
Putative hect E3 ubiquitin ligase Fragment (1759 aa)
     
   
  0.560
Zm.26063
E3 ubiquitin-protein ligase UPL4 (1210 aa)
     
   
  0.560
GRMZM2G124297_P01
E3 ubiquitin-protein ligase UPL4-like (998 aa)
     
   
  0.560
Zm.84476
E3 ubiquitin-protein ligase UPL3-like (1877 aa)
     
   
  0.560
GRMZM2G109041_P01
Annotation not available (610 aa)
       
 
  0.553
GRMZM2G431691_P01
Uncharacterized protein (379 aa)
     
 
  0.542
GRMZM2G159597_P01
Uncharacterized protein (236 aa)
     
 
  0.542
GRMZM2G157933_P01
Uncharacterized protein (326 aa)
     
 
  0.542
GRMZM5G882189_P01
Uncharacterized protein (768 aa)
       
 
  0.541
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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