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STRINGSTRING
cl8680_1 protein (Zea mays) - STRING interaction network
"cl8680_1" - Carboxypeptidase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl8680_1Carboxypeptidase; Belongs to the peptidase S10 family (505 aa)    
Predicted Functional Partners:
100273248
Genomes uncoupled4-like protein (271 aa)
           
  0.739
103636232
Brassinosteroid insensitive1a; Putative leucine-rich repeat receptor-like protein kinase family protein (1122 aa)
           
  0.714
tds919.17b
annotation not available (693 aa)
           
  0.708
GRMZM6G522911_P01
Anaphase-promoting complex subunit 13 (72 aa)
           
  0.707
100281428
Acylamino-acid-releasing enzyme (803 aa)
           
  0.651
pco091746
annotation not available (586 aa)
           
  0.651
GRMZM2G040326_P01
annotation not available (117 aa)
           
  0.651
GRMZM2G117012_P01
annotation not available (121 aa)
           
  0.644
100284583
NAD(P)-binding Rossmann-fold superfamily protein; Uncharacterized protein; WW domain-containing oxidoreductase ; Belongs to the short-chain dehydrogenases/reductases (SDR) family (407 aa)
           
  0.644
TIDP2846
ADP-ribosylation factor 3; Uncharacterized protein (660 aa)
       
 
  0.643
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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