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Zm.139685 protein (Zea mays) - STRING interaction network
"Zm.139685" - Thylakoid assembly 1 in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Zm.139685Thylakoid assembly 1 (127 aa)    
Predicted Functional Partners:
SECY
Preprotein translocase subunit secY, chloroplastic Precursor (CpSecY); The central subunit of the protein translocation channel SecYE. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug (By similarity) (553 aa)
   
 
  0.974
GRMZM2G021270_P01
Hypothetical protein LOC100193866 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1412 aa)
     
 
  0.937
GRMZM2G391325_P01
Annotation not available (759 aa)
       
 
  0.924
GRMZM5G866861_P02
Preprotein translocase secY subunit (524 aa)
   
 
  0.912
Zm.144404
Hypothetical protein LOC100276798 (475 aa)
   
 
  0.912
pco109407
Hypothetical protein LOC100280289 (475 aa)
   
 
  0.912
GRMZM2G073498_P01
Hypothetical protein LOC100217058 (475 aa)
   
 
  0.912
GRMZM2G170509_P01
Uncharacterized LOC103646099 (229 aa)
     
      0.884
Zm.430
Sigma-like factor2B (528 aa)
 
 
  0.853
sig2B
Sigma-like factor2B (528 aa)
 
 
  0.853
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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