STRINGSTRING
Zm.143030 protein (Zea mays) - STRING interaction network
"Zm.143030" - Ameiotic 1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.143030Ameiotic 1 (782 aa)    
Predicted Functional Partners:
Zm.129151
lysM domain containing protein (127 aa)
           
  0.720
Zm.12330
PHD finger protein (256 aa)
           
  0.621
MATE1
MATE family protein (563 aa)
           
  0.565
Zm.21240
Putative uncharacterized protein (319 aa)
           
  0.559
Zm.96997
DNA binding protein (135 aa)
           
  0.559
GRMZM2G129913_P03
Hypothetical protein LOC100279325 (426 aa)
           
  0.547
GRMZM2G035996_P01
Shaggy kinase homolog Fragment (881 aa)
           
  0.547
GRMZM2G109618_P01
Hypothetical protein LOC100273470 (344 aa)
           
  0.546
PYL2
Hypothetical protein LOC100382238 (LOC100382238), mRNA (205 aa)
           
  0.529
PYL3
Hypothetical protein LOC100383950 (188 aa)
           
  0.477
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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