STRINGSTRING
PPR8522 protein (Zea mays) - STRING interaction network
PPR8522 protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPR8522PPR8522 protein (832 aa)    
Predicted Functional Partners:
Zm.431
Sigma-like factor6 (542 aa)
       
 
  0.923
Zm.44689
Lethal embryo mutant1 (224 aa)
     
   
  0.722
cl36914_1
LOC100281604 (362 aa)
           
  0.560
GRMZM2G003182_P01
Sigma-like factor2B (528 aa)
       
 
  0.548
Zm.21536
SURF1 (344 aa)
     
   
  0.497
Zm.12554
Sigma factor protein (568 aa)
     
 
  0.494
GRMZM2G052457_P01
Uncharacterized protein (434 aa)
       
 
  0.467
GRMZM2G059981_P01
Hypothetical protein LOC100384526 (233 aa)
       
 
  0.464
Zm.163639
OCL4 protein (884 aa)
           
  0.463
GRMZM2G058563_P01
Annotation not available (804 aa)
           
  0.459
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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