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Zm.118411 protein (Zea mays) - STRING interaction network
"Zm.118411" - Splicing factor 45 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.118411Splicing factor 45 (384 aa)    
Predicted Functional Partners:
ms45
Hypothetical protein LOC100273898 (323 aa)
     
  0.849
GRMZM2G100620_P01
Hypothetical protein LOC100272589 (317 aa)
     
  0.849
GRMZM5G832138_P01
Hypothetical protein LOC100304259 (303 aa)
     
    0.844
Zm.21212
U2 snRNP-associated SURP motif-containing protein-like (949 aa)
     
    0.844
GRMZM2G133308_P01
Uncharacterized protein (412 aa)
     
    0.844
cl549_1b
LOC100283416 (382 aa)
         
 
0.800
Zm.140206
Nucleic acid binding proteinPutative uncharacterized protein ; (297 aa)
     
 
  0.716
GRMZM2G410393_P01
Hypothetical protein LOC100277544 (1280 aa)
     
  0.712
Zm.32975
Uncharacterized protein (1280 aa)
     
  0.712
GRMZM2G494600_P01
Uncharacterized protein (487 aa)
     
 
    0.697
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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