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STRINGSTRING
gpm667 protein (Zea mays) - STRING interaction network
"gpm667" - Retinoblastoma-binding protein-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm667Retinoblastoma-binding protein-like (589 aa)    
Predicted Functional Partners:
GRMZM2G453008_P01
Protein TRAUCO (226 aa)
     
 
  0.985
GRMZM2G145666_P01
Protein TRAUCO (454 aa)
     
 
  0.985
AC203535.4_FGP001
CDC5 protein (925 aa)
     
      0.941
100501309
Histone-lysine N-methyltransferase ATX2 (982 aa)
     
 
  0.939
pco089076
COMPASS-like H3K4 histone methylase component WDR5B (328 aa)
     
 
  0.938
100285399
Transducin/WD40 repeat-like superfamily protein; Set1 complex component swd2; Uncharacterized protein (318 aa)
     
 
  0.927
GRMZM2G079723_P01
Transducin/WD40 repeat-like superfamily protein (267 aa)
     
 
  0.927
100273578
Transducin/WD40 repeat-like superfamily protein; Set1 complex component swd2; Uncharacterized protein (327 aa)
     
 
  0.927
cl24641_1
Transducin/WD40 repeat-like superfamily protein (336 aa)
     
 
  0.927
GRMZM2G115453_P01
Uncharacterized protein (177 aa)
     
 
  0.923
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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