STRINGSTRING
NAC40 protein (Zea mays) - STRING interaction network
"NAC40" - NAC domain protein NAC5 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAC40NAC domain protein NAC5 (348 aa)    
Predicted Functional Partners:
GRMZM2G094892_P01
Hypothetical protein LOC100382992 (396 aa)
           
  0.721
umc2278
LOC100285388 (315 aa)
           
  0.721
PYL12
Hypothetical protein LOC100274679 (212 aa)
           
  0.715
PP2C1
Probable protein phosphatase 2C 53 (459 aa)
           
  0.560
IDP2428
Protein phosphatase type-2C (366 aa)
           
  0.560
GRMZM5G896260_P01
Indole-3-acetate beta-glucosyltransferase (351 aa)
           
  0.558
Zm.86184
R2R3MYB-domain protein Fragment (324 aa)
           
  0.530
ARF2
Hypothetical protein LOC100304210 ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (681 aa)
           
  0.530
IAGLU
Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121)(IAA-Glu synthase)((Uridine 5’-diphosphate-glucose-indol-3-ylacetyl)-beta-D-glucosyl transferase) (471 aa)
           
  0.465
Zm.6081
Hypothetical protein LOC100276151 (118 aa)
           
  0.452
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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