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Zm.133722 protein (Zea mays) - STRING interaction network
"Zm.133722" - ATG1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.133722ATG1 (LOC100285875), mRNA (259 aa)    
Predicted Functional Partners:
GRMZM5G898647_P01
Cytochrome c biogenesis C (240 aa)
 
  0.985
ccmC
Cytochrome c biogenesis C (240 aa)
 
  0.985
GRMZM2G407837_P01
Cytochrome c biogenesis C (240 aa)
 
  0.983
GRMZM5G867512_P01
Cytochrome c biogenesis FN (620 aa)
 
 
  0.983
ccmFN
Cytochrome c biogenesis FN (621 aa)
 
 
  0.983
ccsA
Cytochrome c biogenesis protein ccsA ; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment (215 aa)
   
  0.966
GRMZM2G364287_P01
Annotation not available (197 aa)
   
  0.966
GRMZM2G329222_P01
ABC transporter I family member 1-like (220 aa)
 
 
  0.861
GRMZM5G851215_P01
ABC transporter I family member 1-like (220 aa)
 
 
  0.858
GRMZM2G461593_P01
Annotation not available (220 aa)
 
 
  0.858
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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