K7VC27_MAIZE protein (Zea mays) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K7VC27_MAIZE

Putative HLH DNA-binding domain superfamily protein. (703 aa)

Predicted Functional Partners:

Pco139385c

0.941

B4G0I3_MAIZE

0.941

MPK7

0.916

Mpk2

0.916

Myc7

0.900

A0A1D6EPM4

0.888

A0A1D6Q1C6

0.888

IDP1683

0.882

Pco123637(113)

0.866

A0A1D6HJC0

0.832

Your Current Organism:

Zea mays

NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D6EPM4	B4G0I3_MAIZE	A0A1D6EPM4	B4G0I3	Protein TIFY 6B.	Protein TIFY 9.	0.538
A0A1D6EPM4	K7VC27_MAIZE	A0A1D6EPM4	K7VC27	Protein TIFY 6B.	Putative HLH DNA-binding domain superfamily protein.	0.888
A0A1D6EPM4	Myc7	A0A1D6EPM4	A0A1D6K972	Protein TIFY 6B.	Myc transcription factor7.	0.888
A0A1D6HJC0	B4G0I3_MAIZE	A0A1D6HJC0	B4G0I3	Tify domain-containing protein.	Protein TIFY 9.	0.688
A0A1D6HJC0	IDP1683	A0A1D6HJC0	C0PIV0	Tify domain-containing protein.	Putative tify domain/CCT motif transcription factor family protein isoform 1.	0.529
A0A1D6HJC0	K7VC27_MAIZE	A0A1D6HJC0	K7VC27	Tify domain-containing protein.	Putative HLH DNA-binding domain superfamily protein.	0.832
A0A1D6HJC0	Myc7	A0A1D6HJC0	A0A1D6K972	Tify domain-containing protein.	Myc transcription factor7.	0.832
A0A1D6HJC0	Pco123637(113)	A0A1D6HJC0	C4IZT6	Tify domain-containing protein.	ZIM transcription factor.	0.458
A0A1D6Q1C6	B4G0I3_MAIZE	A0A1D6Q1C6	B4G0I3	Protein TIFY 6B.	Protein TIFY 9.	0.538
A0A1D6Q1C6	K7VC27_MAIZE	A0A1D6Q1C6	K7VC27	Protein TIFY 6B.	Putative HLH DNA-binding domain superfamily protein.	0.888
A0A1D6Q1C6	Myc7	A0A1D6Q1C6	A0A1D6K972	Protein TIFY 6B.	Myc transcription factor7.	0.888
B4G0I3_MAIZE	A0A1D6EPM4	B4G0I3	A0A1D6EPM4	Protein TIFY 9.	Protein TIFY 6B.	0.538
B4G0I3_MAIZE	A0A1D6HJC0	B4G0I3	A0A1D6HJC0	Protein TIFY 9.	Tify domain-containing protein.	0.688
B4G0I3_MAIZE	A0A1D6Q1C6	B4G0I3	A0A1D6Q1C6	Protein TIFY 9.	Protein TIFY 6B.	0.538
B4G0I3_MAIZE	IDP1683	B4G0I3	C0PIV0	Protein TIFY 9.	Putative tify domain/CCT motif transcription factor family protein isoform 1.	0.475
B4G0I3_MAIZE	K7VC27_MAIZE	B4G0I3	K7VC27	Protein TIFY 9.	Putative HLH DNA-binding domain superfamily protein.	0.941
B4G0I3_MAIZE	Myc7	B4G0I3	A0A1D6K972	Protein TIFY 9.	Myc transcription factor7.	0.941
IDP1683	A0A1D6HJC0	C0PIV0	A0A1D6HJC0	Putative tify domain/CCT motif transcription factor family protein isoform 1.	Tify domain-containing protein.	0.529
IDP1683	B4G0I3_MAIZE	C0PIV0	B4G0I3	Putative tify domain/CCT motif transcription factor family protein isoform 1.	Protein TIFY 9.	0.475
IDP1683	K7VC27_MAIZE	C0PIV0	K7VC27	Putative tify domain/CCT motif transcription factor family protein isoform 1.	Putative HLH DNA-binding domain superfamily protein.	0.882