STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pco0607924,5-DOPA dioxygenase extradiol. (355 aa)    
Predicted Functional Partners:
A0A1D6PWC9
Tyrosine decarboxylase 1.
   
 
  0.902
B4G0K6_MAIZE
Tyrosine decarboxylase 1.
   
 
  0.902
B8A0V8_MAIZE
Tyrosine decarboxylase 1.
   
 
  0.902
C0PCE9_MAIZE
Tyrosine decarboxylase 1.
   
 
  0.902
K7TUI5_MAIZE
Tyrosine decarboxylase 1.
   
 
  0.902
A0A1D6N5L5
Extradiol ring-cleavage dioxygenase.
  
  
 
0.900
Tm20
Transmembrane protein20.
      
 0.890
A0A1D6I9E7
Heat stress transcription factor B-2b.
      
 0.780
Pco106241
Amino acid transporter-like protein.
      
 0.779
Pco119359
SGS domain-containing protein.
      
 0.779
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.