STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_2655Conserved hypothetical protein; putative periplasmic or secreted lipoprotein. (187 aa)    
Predicted Functional Partners:
yraO
DnaA initiator-associating factor for replication initiation.
  
    0.846
Lrub_2654
Hemolysin, lipoprotein.
 
    
0.841
Lrub_2657
Hypothetical protein; Belongs to the UPF0102 family.
       0.752
Lrub_2658
Lipoprotein.
  
    0.653
Lrub_1330
Transmembrane protein.
  
    0.585
sdhD
Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
  
     0.528
rsmI
Tetrapyrrole (corrin/porphyrin) methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.511
sdhC
Succinate dehydrogenase, cytochrome b556 subunit.
  
     0.493
yjbJ_1
Stress response protein; Belongs to the UPF0337 (CsbD) family.
  
    0.475
yjbJ_2
Stress response protein; Belongs to the UPF0337 (CsbD) family.
  
    0.475
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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