node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Shal_0498 | selA | Shal_0498 | Shal_0497 | TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 3; KEGG: she:Shewmr4_0107 selenocysteine-specific translation elongation factor. | L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. | 0.982 |
Shal_0498 | selD | Shal_0498 | Shal_4157 | TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 3; KEGG: she:Shewmr4_0107 selenocysteine-specific translation elongation factor. | Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. | 0.896 |
Shal_0498 | selU | Shal_0498 | Shal_4158 | TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 3; KEGG: she:Shewmr4_0107 selenocysteine-specific translation elongation factor. | Rhodanese domain protein; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.511 |
Shal_2528 | Shal_2529 | Shal_2528 | Shal_2529 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: saz:Sama_1545 binding-protein-dependent transport systems inner membrane component. | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_2346 ABC transporter-related protein. | 0.993 |
Shal_2528 | Shal_2530 | Shal_2528 | Shal_2530 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: saz:Sama_1545 binding-protein-dependent transport systems inner membrane component. | TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: saz:Sama_1543 putative phosphonate ABC transporter, periplasmic phosphonate-binding protein. | 0.991 |
Shal_2528 | selD | Shal_2528 | Shal_4157 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: saz:Sama_1545 binding-protein-dependent transport systems inner membrane component. | Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. | 0.442 |
Shal_2528 | selU | Shal_2528 | Shal_4158 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: saz:Sama_1545 binding-protein-dependent transport systems inner membrane component. | Rhodanese domain protein; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.590 |
Shal_2529 | Shal_2528 | Shal_2529 | Shal_2528 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_2346 ABC transporter-related protein. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: saz:Sama_1545 binding-protein-dependent transport systems inner membrane component. | 0.993 |
Shal_2529 | Shal_2530 | Shal_2529 | Shal_2530 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_2346 ABC transporter-related protein. | TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: saz:Sama_1543 putative phosphonate ABC transporter, periplasmic phosphonate-binding protein. | 0.996 |
Shal_2529 | selU | Shal_2529 | Shal_4158 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_2346 ABC transporter-related protein. | Rhodanese domain protein; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.473 |
Shal_2530 | Shal_2528 | Shal_2530 | Shal_2528 | TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: saz:Sama_1543 putative phosphonate ABC transporter, periplasmic phosphonate-binding protein. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: saz:Sama_1545 binding-protein-dependent transport systems inner membrane component. | 0.991 |
Shal_2530 | Shal_2529 | Shal_2530 | Shal_2529 | TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: saz:Sama_1543 putative phosphonate ABC transporter, periplasmic phosphonate-binding protein. | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_2346 ABC transporter-related protein. | 0.996 |
Shal_2530 | selD | Shal_2530 | Shal_4157 | TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: saz:Sama_1543 putative phosphonate ABC transporter, periplasmic phosphonate-binding protein. | Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. | 0.534 |
Shal_2530 | selU | Shal_2530 | Shal_4158 | TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: saz:Sama_1543 putative phosphonate ABC transporter, periplasmic phosphonate-binding protein. | Rhodanese domain protein; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.667 |
Shal_4156 | selD | Shal_4156 | Shal_4157 | Stearoyl-CoA 9-desaturase; PFAM: fatty acid desaturase; KEGG: shw:Sputw3181_3679 stearoyl-CoA 9-desaturase. | Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. | 0.751 |
Shal_4156 | selU | Shal_4156 | Shal_4158 | Stearoyl-CoA 9-desaturase; PFAM: fatty acid desaturase; KEGG: shw:Sputw3181_3679 stearoyl-CoA 9-desaturase. | Rhodanese domain protein; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.479 |
mnmA | selU | Shal_1715 | Shal_4158 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | Rhodanese domain protein; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain. | 0.611 |
mnmA | thiI | Shal_1715 | Shal_3075 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.536 |
selA | Shal_0498 | Shal_0497 | Shal_0498 | L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. | TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 3; KEGG: she:Shewmr4_0107 selenocysteine-specific translation elongation factor. | 0.982 |
selA | selD | Shal_0497 | Shal_4157 | L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. | Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. | 0.987 |