STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLOAM1493Hypothetical protein; No homology to any previously reported sequences. (755 aa)    
Predicted Functional Partners:
CLOAM1492
Putative enzyme with radical SAM domain protein (Fe-S oxidoreductases); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.805
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.782
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECPS) (MECDP-synthase); Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
       0.768
CLOAM1487
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative enzyme.
  
    0.764
CLOAM1488
Putative Molybdopterin-guanine dinucleotide biosynthesis protein B.
       0.764
lpxC/fabZ
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
 
  
 0.763
CLOAM1486
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative enzyme.
       0.762
CLOAM1490
Glutamine---fructose-6-phosphate transaminase (isomerizing); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.762
CLOAM1419
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.749
CLOAM1268
Hypothetical protein; No homology to any previously reported sequences.
 
   
 0.740
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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