STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_6890KEGG: met:M446_5821 hypothetical protein. (172 aa)    
Predicted Functional Partners:
Mnod_6893
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: met:M446_5824 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
  
 0.964
Mnod_6886
TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: met:M446_5817 cytochrome c oxidase, subunit II.
 
   
 0.958
Mnod_6891
KEGG: met:M446_5822 hypothetical protein.
 
  
 0.958
Mnod_6883
TIGRFAM: caa(3)-type oxidase, subunit IV; KEGG: mex:Mext_0225 caa(3)-type oxidase, subunit IV.
 
   
 0.957
Mnod_6892
PFAM: Polysulphide reductase NrfD; KEGG: met:M446_5823 polysulphide reductase NrfD.
 
   
 0.956
Mnod_6887
KEGG: met:M446_5818 hypothetical protein.
 
   
 0.955
Mnod_6894
KEGG: met:M446_5825 chaperone protein HtpG.
 
   
 0.955
Mnod_6889
KEGG: met:M446_5820 hypothetical protein.
 
    0.952
Mnod_6884
PFAM: cytochrome c oxidase subunit III; KEGG: met:M446_5815 cytochrome c oxidase subunit III.
 
   
 0.935
Mnod_6885
TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; KEGG: met:M446_5816 cytochrome c oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.896
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.