STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_7033PFAM: transposase IS4 family protein; KEGG: ana:alr9024 transposase. (559 aa)    
Predicted Functional Partners:
Mnod_2977
KEGG: rca:Rcas_3465 hypothetical protein.
  
     0.650
Mnod_6189
PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: pde:Pden_3281 transposase, IS204/IS1001/IS1096/IS1165 family protein.
  
     0.614
Mnod_2991
PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: mlo:mll5961 transposase.
  
     0.610
Mnod_3101
PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: mlo:mll5961 transposase.
  
     0.610
Mnod_4601
PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: mlo:mll5961 transposase.
  
     0.610
Mnod_6181
KEGG: rle:pRL70101 hypothetical protein.
  
     0.604
Mnod_5217
PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: met:M446_2960 cupin 2 domain-containing protein.
  
     0.593
Mnod_4088
PFAM: protein of unknown function DUF927; Bifunctional DNA primase/polymerase; KEGG: swi:Swit_2196 P4 family phage/plasmid primase.
  
     0.571
Mnod_2621
PFAM: protein of unknown function DUF927; Bifunctional DNA primase/polymerase; KEGG: swi:Swit_2196 P4 family phage/plasmid primase.
  
     0.568
Mnod_7603
KEGG: mrd:Mrad2831_6371 hypothetical protein.
  
     0.542
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.