STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_02867Meiosis-specific nuclear structural protein 1. (553 aa)    
Predicted Functional Partners:
AMSG_00443
Uncharacterized protein.
   
 0.771
AMSG_00837
Uncharacterized protein.
    
 0.756
AMSG_06009
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.756
AMSG_02432
Uncharacterized protein.
   
 0.707
AMSG_08963
ANK_REP_REGION domain-containing protein.
   
  0.660
AMSG_11845
PI31_Prot_N domain-containing protein.
    
 0.638
AMSG_12190
Uncharacterized protein.
    
 0.638
AMSG_12313
Uncharacterized protein.
    
 0.638
AMSG_09951
FCH domain-containing protein.
    
 0.631
AMSG_10455
Rho GTPase-activating protein 22.
    
 0.631
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.