STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_02140Uncharacterized protein. (651 aa)    
Predicted Functional Partners:
AMSG_08067
Ubiquitin/ribosomal protein S27 fusion protein.
    
 0.721
AMSG_02492
Ubiquitin-conjugating enzyme family protein.
    
 0.686
AMSG_01478
Uncharacterized protein.
    
 0.686
AMSG_07946
Ubiquitin C.
    
 0.685
AMSG_12202
Uncharacterized protein.
    
 0.685
AMSG_11874
Ubiquitin-like domain-containing protein.
    
  0.675
AMSG_10625
Ubiquitin-60S ribosomal protein L40.
    
  0.675
AMSG_07752
26S proteasome non-ATPase regulatory subunit 4.
    
 0.655
AMSG_03698
BMH1 protein; Belongs to the 14-3-3 family.
    
 0.610
AMSG_04940
14-3-3 family protein epsilon; Belongs to the 14-3-3 family.
    
 0.610
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.