STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK70702.1Glycosyltransferase involved in cell wall bisynthesis. (461 aa)    
Predicted Functional Partners:
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.828
SEK70562.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.811
SEK70679.1
4Fe-4S single cluster domain-containing protein.
 
     0.774
SEK47371.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
 
 0.730
SEK70603.1
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein.
 
     0.717
SEK23442.1
Accessory Sec system glycosyltransferase GtfB.
   
 
 0.689
asp3
Accessory secretory protein Asp3.
   
 
 0.683
SEK70643.1
Hypothetical protein.
       0.682
SEK70478.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.677
SEK70777.1
Protein of unknown function.
  
 
  0.662
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.