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GSMUA_Achr9P18360_001 protein (Musa acuminata) - STRING interaction network
"GSMUA_Achr9P18360_001" - Putative Homeobox-leucine zipper protein HOX16 in Musa acuminata
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSMUA_Achr9P18360_001Putative Homeobox-leucine zipper protein HOX16 (283 aa)    
Predicted Functional Partners:
103976342
Homeobox protein knotted-1-like 3 (291 aa)
           
  0.516
GSMUA_Achr8P10180_001
Uncharacterized protein; WD domain, G-beta repeat domain containing protein, expressed (1366 aa)
           
  0.515
103986624
Uncharacterized protein (335 aa)
           
  0.515
GSMUA_Achr10P18640_001
Uncharacterized protein; Indole-3-acetic acid-amido synthetase GH3.17 (549 aa)
           
  0.515
GSMUA_Achr6P02700_001
Uncharacterized protein (238 aa)
       
 
  0.482
GSMUA_Achr10P29790_001
Uncharacterized protein (261 aa)
       
 
  0.482
GSMUA_Achr11P08400_001
Putative UPF0098 protein MTH_273 (247 aa)
           
  0.435
Your Current Organism:
Musa acuminata
NCBI taxonomy Id: 4641
Other names: M. acuminata, Musa AA Group, Musa acuminata, Musa acuminata AA Group, Musa acuminata Colla, Musa nana, banana, dessert bananas, dwarf banana, sweet banana
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