STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aaeXProtein AaeX; silverDB:etchr00291. (67 aa)    
Predicted Functional Partners:
aaeB
P-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B); Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family.
 
    0.963
aaeA
P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux pump protein A); Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
    0.925
ompX
Virulence-related outer membrane protein X; silverDB:etchr02191.
  
     0.773
sseB
Enhanced serine sensitivity; silverDB:etchr01013.
  
     0.771
yciC
Conserved hypothetical protein YciC; silverDB:etchr01586.
  
     0.767
ypfN
Conserved hypothetical protein YpfN; silverDB:etchr01062.
  
     0.766
ygaC
Putative cytoplasmic protein; silverDB:etchr00932.
  
     0.765
tus
DNA replication terminus site-binding protein (Ter protein); silverDB:etchr01751.
  
     0.765
tsgA
Fucose permease TsgA; silverDB:etchr03181.
  
     0.761
ymoB
Putative YmoB (similar to YbaJ) associated to the expression of invasin; silverDB:etchr02476.
  
     0.759
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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