STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA_11230Senescence marker protein-30; silverDB:etchr01114. (294 aa)    
Predicted Functional Partners:
gcd
Quinoprotein glucose dehydrogenase; silverDB:etchr02373.
  
  
 0.630
ETA_30600
Gluconate 2-dehydrogenase flavoprotein (GADH dehydrogenase subunit); silverDB:etchr03047.
   
 
 0.524
ETA_30610
Gluconate 2-dehydrogenase subunit 3; silverDB:etchr03048.
     
 0.505
ETA_30590
Gluconate 2-dehydrogenase cytochrome c subunit; silverDB:etchr03046.
     
 0.503
ETA_33580
Putative gluconolactonase; silverDB:etchr03344.
  
     0.502
rplQ
50S ribosomal protein L17; silverDB:etchr03124.
 
      0.462
ETA_11220
Hypothetical protein; silverDB:etchr01113.
       0.427
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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