Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ETA_11220 | ETA_11230 | ETA_11220 | ETA_11230 | Hypothetical protein; silverDB:etchr01113. | Senescence marker protein-30; silverDB:etchr01114. | 0.427 |
ETA_11230 | ETA_11220 | ETA_11230 | ETA_11220 | Senescence marker protein-30; silverDB:etchr01114. | Hypothetical protein; silverDB:etchr01113. | 0.427 |
ETA_11230 | ETA_30590 | ETA_11230 | ETA_30590 | Senescence marker protein-30; silverDB:etchr01114. | Gluconate 2-dehydrogenase cytochrome c subunit; silverDB:etchr03046. | 0.503 |
ETA_11230 | ETA_30600 | ETA_11230 | ETA_30600 | Senescence marker protein-30; silverDB:etchr01114. | Gluconate 2-dehydrogenase flavoprotein (GADH dehydrogenase subunit); silverDB:etchr03047. | 0.524 |
ETA_11230 | ETA_30610 | ETA_11230 | ETA_30610 | Senescence marker protein-30; silverDB:etchr01114. | Gluconate 2-dehydrogenase subunit 3; silverDB:etchr03048. | 0.505 |
ETA_11230 | ETA_33580 | ETA_11230 | ETA_33580 | Senescence marker protein-30; silverDB:etchr01114. | Putative gluconolactonase; silverDB:etchr03344. | 0.502 |
ETA_11230 | gcd | ETA_11230 | ETA_23850 | Senescence marker protein-30; silverDB:etchr01114. | Quinoprotein glucose dehydrogenase; silverDB:etchr02373. | 0.630 |
ETA_11230 | rplQ | ETA_11230 | ETA_31370 | Senescence marker protein-30; silverDB:etchr01114. | 50S ribosomal protein L17; silverDB:etchr03124. | 0.462 |
ETA_30590 | ETA_11230 | ETA_30590 | ETA_11230 | Gluconate 2-dehydrogenase cytochrome c subunit; silverDB:etchr03046. | Senescence marker protein-30; silverDB:etchr01114. | 0.503 |
ETA_30590 | ETA_30600 | ETA_30590 | ETA_30600 | Gluconate 2-dehydrogenase cytochrome c subunit; silverDB:etchr03046. | Gluconate 2-dehydrogenase flavoprotein (GADH dehydrogenase subunit); silverDB:etchr03047. | 0.988 |
ETA_30590 | ETA_30610 | ETA_30590 | ETA_30610 | Gluconate 2-dehydrogenase cytochrome c subunit; silverDB:etchr03046. | Gluconate 2-dehydrogenase subunit 3; silverDB:etchr03048. | 0.944 |
ETA_30590 | ETA_33580 | ETA_30590 | ETA_33580 | Gluconate 2-dehydrogenase cytochrome c subunit; silverDB:etchr03046. | Putative gluconolactonase; silverDB:etchr03344. | 0.503 |
ETA_30600 | ETA_11230 | ETA_30600 | ETA_11230 | Gluconate 2-dehydrogenase flavoprotein (GADH dehydrogenase subunit); silverDB:etchr03047. | Senescence marker protein-30; silverDB:etchr01114. | 0.524 |
ETA_30600 | ETA_30590 | ETA_30600 | ETA_30590 | Gluconate 2-dehydrogenase flavoprotein (GADH dehydrogenase subunit); silverDB:etchr03047. | Gluconate 2-dehydrogenase cytochrome c subunit; silverDB:etchr03046. | 0.988 |
ETA_30600 | ETA_30610 | ETA_30600 | ETA_30610 | Gluconate 2-dehydrogenase flavoprotein (GADH dehydrogenase subunit); silverDB:etchr03047. | Gluconate 2-dehydrogenase subunit 3; silverDB:etchr03048. | 0.995 |
ETA_30600 | ETA_33580 | ETA_30600 | ETA_33580 | Gluconate 2-dehydrogenase flavoprotein (GADH dehydrogenase subunit); silverDB:etchr03047. | Putative gluconolactonase; silverDB:etchr03344. | 0.912 |
ETA_30610 | ETA_11230 | ETA_30610 | ETA_11230 | Gluconate 2-dehydrogenase subunit 3; silverDB:etchr03048. | Senescence marker protein-30; silverDB:etchr01114. | 0.505 |
ETA_30610 | ETA_30590 | ETA_30610 | ETA_30590 | Gluconate 2-dehydrogenase subunit 3; silverDB:etchr03048. | Gluconate 2-dehydrogenase cytochrome c subunit; silverDB:etchr03046. | 0.944 |
ETA_30610 | ETA_30600 | ETA_30610 | ETA_30600 | Gluconate 2-dehydrogenase subunit 3; silverDB:etchr03048. | Gluconate 2-dehydrogenase flavoprotein (GADH dehydrogenase subunit); silverDB:etchr03047. | 0.995 |
ETA_30610 | ETA_33580 | ETA_30610 | ETA_33580 | Gluconate 2-dehydrogenase subunit 3; silverDB:etchr03048. | Putative gluconolactonase; silverDB:etchr03344. | 0.901 |
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