STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araBRibulokinase; silverDB:etchr01760. (563 aa)    
Predicted Functional Partners:
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.999
araD
L-ribulose-5-phosphate 4-epimerase; silverDB:etchr01617.
 
 
 0.988
rpe
Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase); silverDB:etchr03188; Belongs to the ribulose-phosphate 3-epimerase family.
 
   
 0.908
kdgK
2-dehydro-3-deoxygluconokinase; silverDB:etchr01236.
     
 0.807
ETA_34390
Sugar kinase, ribokinase family; silverDB:etchr03425.
     
 0.807
gnd
Gluconate-6-phosphate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
     
  0.800
rpiA
Ribose-5-phosphate isomerase A 1 (Phosphoriboisomerase A 1); Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
     
  0.800
araC
Arabinose operon regulatory protein; silverDB:etchr01756.
 
   
 0.736
araF
L-arabinose-binding periplasmic protein; silverDB:etchr01759.
 
  
 0.631
galM
Galactose 1-epimerase (Mutarotase); Converts alpha-aldose to the beta-anomer.
 
     0.486
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
Server load: medium (78%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.