STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38139.1CrtT protein. (243 aa)    
Predicted Functional Partners:
EFL38138.1
Dehydrogenase.
  
 0.987
EFL38140.1
Lycopene cyclase.
    
 0.888
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.819
EFL37539.1
Condensation domain-containing protein; Unextendable partial coding region.
     
 0.756
EFL37540.1
Condensation domain-containing protein.
     
 0.756
EFL43484.1
Polyketide synthase.
     
 0.725
EFL38136.1
Phytoene desaturase.
 
 
 0.644
EFL39371.1
Syringomycin synthetase.
     
 0.636
EFL38504.1
Sarcosine oxidase.
     
  0.603
EFL41633.1
Non-ribosomal peptide synthetase.
     
 0.586
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.