STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38673.1Phosphodiesterase; Unextendable partial coding region. (371 aa)    
Predicted Functional Partners:
EFL38674.1
Conserved hypothetical protein.
 
     0.799
tdk
Thymidine kinase.
       0.727
EFL42524.1
Phosphoglucomutase/phosphomannomutase.
  
 
  0.683
atpE
ATP synthase subunit C (Lipid-binding protein); F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
  
  0.601
EFL38677.1
HPr family phosphocarrier.
       0.572
EFL42518.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
    
  0.570
EFL43147.1
Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family.
    
  0.570
EFL37503.1
PE-PGRS family protein; Belongs to the V-ATPase 116 kDa subunit family.
   
 
  0.555
nadD
Nicotinate nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
    
 0.534
EFL39009.1
Alpha-glucan phosphorylase.
     
 0.533
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.