STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL39378.1Bifunctional penicillin-binding protein 1a/1b pona1. (762 aa)    
Predicted Functional Partners:
EFL41844.1
DivIVA domain-containing protein.
   
 
 0.938
EFL42799.1
PE-PGRS family protein.
   
 
 0.889
EFL39153.1
Penicillin-binding protein.
  
 
 0.802
EFL40272.1
Penicillin-binding protein.
  
 
 0.759
EFL40305.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
   
 
 0.744
EFL40818.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
   
 
 0.744
EFL40902.1
Penicillin-binding protein.
  
 
 0.744
EFL41835.1
Cell division protein FtsW; Belongs to the SEDS family.
  
  
 0.736
EFL41830.1
Penicillin-binding protein 3.
  
 
0.719
EFL41373.1
Penicillin-binding protein 2.
  
 
 0.711
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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