STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40421.1Membrane protein. (70 aa)    
Predicted Functional Partners:
EFL40420.1
Cupin domain-containing protein.
       0.759
EFL40422.1
IclR-family transcriptional regulator.
       0.733
EFL40417.1
Cys/Met metabolism PLP-dependent enzyme.
       0.715
EFL40418.1
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.715
EFL40419.1
Membrane protein.
       0.715
EFL40423.1
Conserved hypothetical protein.
       0.689
EFL40416.1
HTH-type transcriptional regulator AraB; Belongs to the LysR transcriptional regulatory family.
       0.661
EFL40415.1
NUDIX family hydrolase.
       0.647
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.