Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFL37742.1 | EFL42229.1 | SSRG_00546 | SSRG_05033 | Conserved hypothetical protein. | SEC-C domain-containing protein domain-containing protein; Belongs to the UPF0225 family. | 0.572 |
| EFL37890.1 | EFL42229.1 | SSRG_00694 | SSRG_05033 | 6-phospho-beta-glucosidase. | SEC-C domain-containing protein domain-containing protein; Belongs to the UPF0225 family. | 0.559 |
| EFL41926.1 | EFL42229.1 | SSRG_04730 | SSRG_05033 | S4 domain-containing protein. | SEC-C domain-containing protein domain-containing protein; Belongs to the UPF0225 family. | 0.415 |
| EFL42229.1 | EFL37742.1 | SSRG_05033 | SSRG_00546 | SEC-C domain-containing protein domain-containing protein; Belongs to the UPF0225 family. | Conserved hypothetical protein. | 0.572 |
| EFL42229.1 | EFL37890.1 | SSRG_05033 | SSRG_00694 | SEC-C domain-containing protein domain-containing protein; Belongs to the UPF0225 family. | 6-phospho-beta-glucosidase. | 0.559 |
| EFL42229.1 | EFL41926.1 | SSRG_05033 | SSRG_04730 | SEC-C domain-containing protein domain-containing protein; Belongs to the UPF0225 family. | S4 domain-containing protein. | 0.415 |
| EFL42229.1 | EFL42230.1 | SSRG_05033 | SSRG_05034 | SEC-C domain-containing protein domain-containing protein; Belongs to the UPF0225 family. | Peptidase family M20/M25/M40 protein. | 0.718 |
| EFL42229.1 | EFL42867.1 | SSRG_05033 | SSRG_05671 | SEC-C domain-containing protein domain-containing protein; Belongs to the UPF0225 family. | SecD/SecF/SecDF export membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.696 |
| EFL42229.1 | ffh | SSRG_05033 | SSRG_01661 | SEC-C domain-containing protein domain-containing protein; Belongs to the UPF0225 family. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.467 |
| EFL42229.1 | secY | SSRG_05033 | SSRG_02489 | SEC-C domain-containing protein domain-containing protein; Belongs to the UPF0225 family. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.526 |
| EFL42230.1 | EFL42229.1 | SSRG_05034 | SSRG_05033 | Peptidase family M20/M25/M40 protein. | SEC-C domain-containing protein domain-containing protein; Belongs to the UPF0225 family. | 0.718 |
| EFL42867.1 | EFL42229.1 | SSRG_05671 | SSRG_05033 | SecD/SecF/SecDF export membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | SEC-C domain-containing protein domain-containing protein; Belongs to the UPF0225 family. | 0.696 |
| EFL42867.1 | ffh | SSRG_05671 | SSRG_01661 | SecD/SecF/SecDF export membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.949 |
| EFL42867.1 | secY | SSRG_05671 | SSRG_02489 | SecD/SecF/SecDF export membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.999 |
| ffh | EFL42229.1 | SSRG_01661 | SSRG_05033 | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | SEC-C domain-containing protein domain-containing protein; Belongs to the UPF0225 family. | 0.467 |
| ffh | EFL42867.1 | SSRG_01661 | SSRG_05671 | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | SecD/SecF/SecDF export membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.949 |
| ffh | secY | SSRG_01661 | SSRG_02489 | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.996 |
| secY | EFL42229.1 | SSRG_02489 | SSRG_05033 | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | SEC-C domain-containing protein domain-containing protein; Belongs to the UPF0225 family. | 0.526 |
| secY | EFL42867.1 | SSRG_02489 | SSRG_05671 | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | SecD/SecF/SecDF export membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.999 |
| secY | ffh | SSRG_02489 | SSRG_01661 | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.996 |