STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB54807.1Putative HTH-type transcriptional regulator DegA; KEGG: amt:Amet_0455 2.1e-34 alanine racemase K01775; Psort location: Cytoplasmic, score: 9.97. (335 aa)    
Predicted Functional Partners:
KXB56983.1
KEGG: rho:RHOM_07925 1.2e-36 PTS system, beta-glucosides-specific IIA component / PTS system, beta-glucosides-specific IIB component / PTS system, beta-glucosides-specific IIC component; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.866
KXB54808.1
Fructan beta-fructosidase domain protein; KEGG: cbe:Cbei_3877 5.3e-107 sucrose-6-phosphate hydrolase; K01193 beta-fructofuranosidase; Psort location: Cytoplasmic, score: 9.97; Belongs to the glycosyl hydrolase 32 family.
 
 
  0.825
KXB56984.1
KEGG: cbe:Cbei_4532 6.7e-203 PTS system, N-acetylglucosamine-specific IIBC subunit; K02803 PTS system, N-acetylglucosamine-specific IIB component K02804; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.741
KXB52985.1
KEGG: cls:CXIVA_15100 7.6e-163 NagE; phosphotransferase system IIA component; K02808 PTS system, sucrose-specific IIA component; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.741
KXB56879.1
4-alpha-glucanotransferase; KEGG: cpy:Cphy_2349 3.0e-152 4-alpha-glucanotransferase K00705; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.724
KXB54806.1
ABC transporter, permease protein; KEGG: tex:Teth514_2199 9.1e-48 monosaccharide-transporting ATPase K02026; Psort location: CytoplasmicMembrane, score: 10.00.
       0.668
KXB54805.1
Putative transmembrane permease MsmF; KEGG: apb:SAR116_1511 5.7e-39 binding-protein-dependent transport system inner membrane protein K02025; Psort location: CytoplasmicMembrane, score: 10.00.
       0.663
rbsK
Putative ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 0.587
KXB54804.1
ABC transporter, solute-binding protein; KEGG: ebe:B21_03866 1.0e-10 malE; malE, subunit of maltose ABC transporter K10108.
 
     0.575
KXB59773.1
Hypothetical protein; KEGG: tle:Tlet_1582 3.9e-15 alanine racemase K02529; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.564
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.