STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB54512.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (270 aa)    
Predicted Functional Partners:
KXB60431.1
Putative ATP-dependent nuclease subunit B; ATP-dependent DNA helicase.
  
 
 0.908
KXB54513.1
Hypothetical protein.
 
  
 0.902
KXB54511.1
KEGG: shn:Shewana3_3590 6.7e-13 single-strand binding protein K03111; Psort location: Cytoplasmic, score: 9.26.
       0.778
KXB54509.1
CHC2 zinc finger domain protein; KEGG: tbe:Trebr_1363 1.6e-13 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
     
 0.777
KXB54508.1
Putative D-tyrosyl-tRNA(Tyr) deacylase; KEGG: epr:EPYR_00059 2.5e-05 putative P4-specific DNA primase K06919; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB54510.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB54514.1
Hypothetical protein.
       0.773
KXB54515.1
Hypothetical protein.
       0.773
KXB57284.1
Hypothetical protein; KEGG: efc:EFAU004_01897 2.8e-09 IS1380 family transposase.
  
     0.734
KXB54516.1
Hypothetical protein.
       0.732
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.