pdam_00016208 protein (Pocillopora damicornis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

pdam_00016208

Uncharacterized protein. (438 aa)

Predicted Functional Partners:

pdam_00021105

0.999

pdam_00015961

0.986

pdam_00012840

0.982

pdam_00005522

0.982

pdam_00021718

0.982

pdam_00005110

0.982

pdam_00000797

0.982

pdam_00001537

0.982

pdam_00007948

0.982

pdam_00018266

0.982

Your Current Organism:

Pocillopora damicornis

NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
pdam_00000797	pdam_00001537	A0A3M6TVB7	A0A3M6U549	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Uncharacterized protein.	0.999
pdam_00000797	pdam_00005110	A0A3M6TVB7	A0A3M6TNH2	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Uncharacterized protein.	0.999
pdam_00000797	pdam_00005522	A0A3M6TVB7	A0A3M6TAC0	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.999
pdam_00000797	pdam_00007948	A0A3M6TVB7	A0A3M6UFV7	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
pdam_00000797	pdam_00012840	A0A3M6TVB7	A0A3M6T859	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	KH type-2 domain-containing protein.	0.999
pdam_00000797	pdam_00015961	A0A3M6TVB7	A0A3M6THB3	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Uncharacterized protein.	0.999
pdam_00000797	pdam_00016208	A0A3M6TVB7	A0A3M6U0H0	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	Uncharacterized protein.	0.982
pdam_00000797	pdam_00018266	A0A3M6TVB7	A0A3M6UH78	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	0.999
pdam_00000797	pdam_00021105	A0A3M6TVB7	A0A3M6UFW5	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
pdam_00000797	pdam_00021718	A0A3M6TVB7	A0A3M6TJ54	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
pdam_00001537	pdam_00000797	A0A3M6U549	A0A3M6TVB7	Uncharacterized protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
pdam_00001537	pdam_00005110	A0A3M6U549	A0A3M6TNH2	Uncharacterized protein.	Uncharacterized protein.	0.999
pdam_00001537	pdam_00005522	A0A3M6U549	A0A3M6TAC0	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.999
pdam_00001537	pdam_00007948	A0A3M6U549	A0A3M6UFV7	Uncharacterized protein.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
pdam_00001537	pdam_00012840	A0A3M6U549	A0A3M6T859	Uncharacterized protein.	KH type-2 domain-containing protein.	0.999
pdam_00001537	pdam_00015961	A0A3M6U549	A0A3M6THB3	Uncharacterized protein.	Uncharacterized protein.	0.999
pdam_00001537	pdam_00016208	A0A3M6U549	A0A3M6U0H0	Uncharacterized protein.	Uncharacterized protein.	0.982
pdam_00001537	pdam_00018266	A0A3M6U549	A0A3M6UH78	Uncharacterized protein.	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	0.999
pdam_00001537	pdam_00021105	A0A3M6U549	A0A3M6UFW5	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
pdam_00001537	pdam_00021718	A0A3M6U549	A0A3M6TJ54	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999