STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00009114Protein kinase domain-containing protein. (225 aa)    
Predicted Functional Partners:
pdam_00017986
Uncharacterized protein; Belongs to the CGI121/TPRKB family.
   
 0.999
pdam_00017662
Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity.
  
 0.998
pdam_00019649
Uncharacterized protein.
   
 0.951
pdam_00018918
YrdC-like domain-containing protein.
   
  
 0.753
pdam_00016598
P53 domain-containing protein.
    
 0.684
pdam_00003344
Uncharacterized protein.
    
 0.684
pdam_00020067
Uncharacterized protein.
 
      0.649
pdam_00004074
WD_REPEATS_REGION domain-containing protein.
   
 
 0.627
pdam_00010775
Uncharacterized protein; Belongs to the V-ATPase proteolipid subunit family.
 
 
    0.611
pdam_00019821
Probable ribosome biogenesis protein pdam_00019821; Probable pre-rRNA processing protein involved in ribosome biogenesis.
 
      0.577
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
Server load: low (26%) [HD]