STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00009227DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1218 aa)    
Predicted Functional Partners:
pdam_00015039
Uncharacterized protein.
   
 0.933
pdam_00009552
Uncharacterized protein.
   
 0.930
pdam_00019763
Uncharacterized protein.
   
 0.926
pdam_00014378
KH_dom_type_1 domain-containing protein.
   
 0.926
pdam_00021212
Uncharacterized protein.
   
 0.924
pdam_00007007
Uncharacterized protein.
   
 0.924
pdam_00007805
Uncharacterized protein.
   
 0.924
pdam_00017124
Uncharacterized protein.
   
 0.912
pdam_00017663
Uncharacterized protein.
   
 0.910
pdam_00016929
HBS1_N domain-containing protein.
   
 0.907
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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