STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00000336PKS_ER domain-containing protein. (365 aa)    
Predicted Functional Partners:
pdam_00004859
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 
 0.965
pdam_00018511
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.953
pdam_00016312
Carrier domain-containing protein.
   
 0.935
pdam_00021145
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.924
pdam_00018765
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.924
pdam_00000404
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.924
pdam_00012738
Uncharacterized protein.
  
 0.920
pdam_00012764
Uncharacterized protein.
  
 
 0.919
pdam_00021697
Thioesterase domain-containing protein.
    
 0.918
pdam_00023410
Acyl-CoA_ox_N domain-containing protein.
  
 
 0.917
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.