STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00006963Mevalonate kinase. (440 aa)    
Predicted Functional Partners:
pdam_00009108
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
 
 
 0.996
pdam_00017398
Uncharacterized protein.
 
      0.898
pdam_00008515
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 
 0.888
pdam_00000795
3-hydroxy-3-methylglutaryl coenzyme A reductase.
  
 0.864
pdam_00010541
Uncharacterized protein.
  
 0.864
pdam_00014949
Nudix hydrolase domain-containing protein.
  
 
 0.847
pdam_00011292
Pyruvate carboxyltransferase domain-containing protein.
    
 0.831
pdam_00002813
Uncharacterized protein.
   
 
 0.820
pdam_00008065
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.786
pdam_00007310
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.786
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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