STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00020387Protein kinase domain-containing protein. (679 aa)    
Predicted Functional Partners:
pdam_00014444
Rhodanese domain-containing protein.
    
 
 0.915
pdam_00012078
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.793
pdam_00006644
Wee1-like protein kinase.
   
 
0.741
pdam_00017968
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.741
pdam_00002517
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
 
 0.730
pdam_00000581
Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
   
 
 0.701
pdam_00014450
Uncharacterized protein.
    
   0.654
pdam_00003044
DOC domain-containing protein.
    
   0.649
pdam_00018390
Uncharacterized protein.
    
 
 0.649
pdam_00004519
Uncharacterized protein.
    
 
 0.649
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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