STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGIG_12630L serine dehydratase:l threonine deaminase. (226 aa)    
Predicted Functional Partners:
FGIG_05947
Threonine dehydratase biosynthetic.
 
      0.895
FGIG_11763
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.742
FGIG_11733
Nuclear cap-binding protein subunit 2.
    
 0.726
FGIG_08292
Nuclear cap-binding protein subunit 1-A.
    
 0.722
FGIG_04947
Serine/arginine-rich splicing factor.
    
 0.717
FGIG_08390
Serine/arginine-rich splicing factor 2.
    
 0.702
FGIG_09741
Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
    
 0.691
FGIG_03758
Eukaryotic translation initiation.
   
 0.691
FGIG_10770
Eukaryotic translation initiation factor 2 alpha subunit.
   
 0.679
FGIG_03141
E3 SUMO-protein ligase RanBP2.
    
 0.670
Your Current Organism:
Fasciola gigantica
NCBI taxonomy Id: 46835
Other names: F. gigantica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.